2009

Aravamuthan, BR, McNab, JA, Miller, KL, Rushworth, M, Jenkinson, N, Stein, JF, and Aziz, TZ (2009).
Cortical and subcortical connections within the pedunculopontine nucleus of the primate Macaca mulatta determined using probabilistic diffusion tractography
J Clin Neurosci 16(3):413–20.

Beckmann, M, Johansen-Berg, H, and Rushworth, MF (2009).
Connectivity-based parcellation of human cingulate cortex and its relation to functional specialization
J Neurosci 29(4):1175–90.

Behrens, TE, Hunt, LT, and Rushworth, MF (2009).
The computation of social behavior
Science 324(5931):1160–4.

Boorman, ED, Behrens, TE, Woolrich, MW, and Rushworth, MF (2009).
How green is the grass on the other side?: Frontopolar cortex and the evidence in favor of alternative courses of action
Neuron 62(5):733–43.

Bulte, DP, Drescher, K, and Jezzard, P (2009).
Comparison of hypercapnia-based calibration techniques for measurement of cerebral oxygen metabolism with MRI
Magn Reson Med 61(2):391–8.

Chappell, M, Groves, AR, Whitcher, B, and Woolrich, MW (2009).
Variational Bayesian Inference for a Nonlinear Forward Model.
IEEE Transactions on Signal Processing 57(1):223–236.

Ciccarelli, O, Behrens, TE, Johansen-Berg, H, Talbot, K, Orrell, RW, Howard, RS, Nunes, RG, Miller, DH, Matthews, PM, Thompson, AJ, and Smith, SM (2009).
Investigation of white matter pathology in ALS and PLS using tract-based spatial statistics
Hum Brain Mapp 30(2):615–24.

Croxson, PL, Walton, ME, O'Reilly, JX, Behrens, TE, and Rushworth, MF (2009).
Effort-based cost-benefit valuation and the human brain
J Neurosci 29(14):4531–41.

Damoiseaux, JS, Smith, SM, Witter, MP, Sanz-Arigita, EJ, Barkhof, F, Scheltens, P, Stam, CJ, Zarei, M, and Rombouts, SA (2009).
White matter tract integrity in aging and Alzheimer's disease
Hum Brain Mapp 30(4):1051–9.

Douaud, G, Behrens, TE, Poupon, C, Cointepas, Y, Jbabdi, S, Gaura, V, Golestani, N, Krystkowiak, P, Verny, C, Damier, P, Bachoud-Levi, AC, Hantraye, P, and Remy, P (2009).
In vivo evidence for the selective subcortical degeneration in Huntington's disease
Neuroimage 46(4):958–66.

Filippini, N, MacIntosh, BJ, Hough, MG, Goodwin, GM, Frisoni, GB, Smith, SM, Matthews, PM, Beckmann, CF, and Mackay, CE (2009).
Distinct patterns of brain activity in young carriers of the APOE-epsilon4 allele
Proc Natl Acad Sci U S A 106(17):7209–14.

Gallichan, D and Jezzard, P (2009).
Variation in the shape of pulsed arterial spin labeling kinetic curves across the healthy human brain and its implications for CBF quantification
Magn Reson Med 61(3):686–95.

Groves, AR, Chappell, MA, and Woolrich, MW (2009).
Combined spatial and non-spatial prior for inference on MRI time-series
Neuroimage 45(3):795–809.

Gutman, DA, Holtzheimer, PE, Behrens, TE, Johansen-Berg, H, and Mayberg, HS (2009).
A tractography analysis of two deep brain stimulation white matter targets for depression
Biol Psychiatry 65(4):276–82.

Jbabdi, S, Woolrich, MW, and Behrens, TE (2009).
Multiple-subjects connectivity-based parcellation using hierarchical Dirichlet process mixture models
Neuroimage 44(2):373–84.

Johansen-Berg, H and Behrens, T (2009).
Diffusion MRI
Academic Press (1st edition)(ISBN: 978-0123747099).

Klein, A, Andersson, J, Ardekani, BA, Ashburner, J, Avants, B, Chiang, MC, Christensen, GE, Collins, DL, Gee, J, Hellier, P, Song, JH, Jenkinson, M, Lepage, C, Rueckert, D, Thompson, P, Vercauteren, T, Woods, RP, Mann, JJ, and Parsey, RV (2009).
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration
Neuroimage 46(3):786–802.

Mancini, L, Ciccarelli, O, Manfredonia, F, Thornton, JS, Agosta, F, Barkhof, F, Beckmann, C, De Stefano, N, Enzinger, C, Fazekas, F, Filippi, M, Gass, A, Hirsch, JG, Johansen-Berg, H, Kappos, L, Korteweg, T, Manson, SC, Marino, S, Matthews, PM, Montalban, X, Palace, J, Polman, C, Rocca, M, Ropele, S, Rovira, A, Wegner, C, Friston, K, Thompson, A, and Yousry, T (2009).
Short-term adaptation to a simple motor task: a physiological process preserved in multiple sclerosis
Neuroimage 45(2):500–11.

McNab, JA, Jbabdi, S, Deoni, SC, Douaud, G, Behrens, TE, and Miller, KL (2009).
High resolution diffusion-weighted imaging in fixed human brain using diffusion-weighted steady state free precession
Neuroimage 46(3):775–85.

Pattinson, KT, Mitsis, GD, Harvey, AK, Jbabdi, S, Dirckx, S, Mayhew, SD, Rogers, R, Tracey, I, and Wise, RG (2009).
Determination of the human brainstem respiratory control network and its cortical connections in vivo using functional and structural imaging
Neuroimage 44(2):295–305.

Piechnik, SK, Evans, J, Bary, LH, Wise, RG, and Jezzard, P (2009).
Functional changes in CSF volume estimated using measurement of water T2 relaxation
Magn Reson Med 61(3):579–86.

Rombouts, SA, Damoiseaux, JS, Goekoop, R, Barkhof, F, Scheltens, P, Smith, SM, and Beckmann, CF (2009).
Model-free group analysis shows altered BOLD FMRI networks in dementia
Hum Brain Mapp 30(1):256–66.

Salimi-Khorshidi, G, Smith, SM, Keltner, JR, Wager, TD, and Nichols, TE (2009).
Meta-analysis of neuroimaging data: a comparison of image-based and coordinate-based pooling of studies
Neuroimage 45(3):810–23.

Smith, SM and Nichols, TE (2009).
Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference
Neuroimage 44(1):83–98.

Stagg, CJ, Best, JG, Stephenson, MC, O'Shea, J, Wylezinska, M, Kincses, ZT, Morris, PG, Matthews, PM, and Johansen-Berg, H (2009).
Polarity-sensitive modulation of cortical neurotransmitters by transcranial stimulation
J Neurosci 29(16):5202–6.