- 1
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D. Alnæs, T. Kaufmann, G. Richard, E. Duff, M.H. Sneve, T. Endestad, J.E.
Norvdvik, O.A. Andreassen, S.M. Smith, and L.T. Westlye.
Attentional load modulates large-scale functional brain connectivity
beyond the core attention networks.
NeuroImage, 109:260-272, 2015.
- 2
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J. Bijsterbosch, S. Smith, and S.J. Bishop.
Functional connectivity under anticipation of shock: correlates of
trait anxious affect versus induced anxiety.
Journal of Cognitive Neuroscience, 27(9):1840-1853, 2015.
- 3
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G.L. Colclough, M.J. Brookes, S.M. Smith, and M.W. Woolrich.
A symmetric multivariate leakage correction for MEG connectomes.
NeuroImage, 117:439-448, 2015.
- 4
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E.P. Duff, W. Vennart, R. Wise, M.A. Howard, R.E. Harris, M. Lee,
K. Wartolowska, V. Wanigasekera, F.J. Wilson, M. Whitlock, I. Tracey, M.W.
Woolrich, and S.M. Smith.
Learning to identify CNS drug action and efficacy using multi-study
fMRI data.
Science Translational Medicine, 7(274):274ra16, 2015.
- 5
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L. Griffanti, O. Dipasquale, M.M. Laganà, R. Nemni, M. Clerici, S.M. Smith,
G. Baselli, and F. Baglio.
Effective artifact removal in resting state fMRI data improves
detection of DMN functional connectivity alteration in Alzheimer's
disease.
Frontiers in Human Neuroscience,
9(449):10.3389/fnhum.2015.00449, 2015.
- 6
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S.J. Harrison, M.W. Woolrich, E.C. Robinson, M.F. Glasser, C.F. Beckmann,
M. Jenkinson, and S.M. Smith.
Large-scale Probabilistic Functional Modes from resting state fMRI.
NeuroImage, 109:217-231, 2015.
- 7
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F. Jernerén, A.K. Elshorbagy, A. Oulhaj, S.M. Smith, H. Refsum, and A.D.
Smith.
Brain atrophy in cognitively impaired elderly: the importance of
long-chain omega-3 fatty acids and B-vitamin status in a randomized
controlled trial.
American Journal of Clinical Nutrition, 102(1):215-221, 2015.
- 8
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T. Kaufmann, K.C. Skåtun, D. Alnæs, N.T. Doan, E.P. Duff,
S. Tønnesen, E. Roussos, T. Ueland, S.R. Aminoff, T.V. Lagerberg,
I. Agartz, I.S. Melle, S.M. Smith, O.A. Andreassen, and L. Westlye.
Disintegration of sensorimotor brain networks in schizophrenia.
Schizophrenia Bulletin, 2015.
in press.
- 9
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S. Smith, T. Nichols, D. Vidaurre, A. Winkler, T. Behrens, M. Glasser,
K. Ugurbil, D. Barch, D. Van Essen, and K. Miller.
A positive-negative mode of population covariation links brain
connectivity, demographics and behavior.
Nature Neuroscience, 2015.
in press.
- 10
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A.M. Winkler, M.A. Webster, D. Vidaurre, T.E. Nichols, and S.M. Smith.
Multi-level block permutation.
NeuroImage, 2015.
in press.
- 11
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A.P. Baker, M.J. Brookes, H.T. Luckhoo, I.A. Rezek, S.M. Smith, T.E.J. Behrens,
P.J. Probert Smith, and M.W. Woolrich.
Fast transient networks in spontaneous human brain activity.
eLife, 3:e01867, 2014.
- 12
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J. Bijsterbosch, S. Smith, S. Forster, O.P. John, and S. Bishop.
Resting state correlates of sub-dimensions of anxious affect.
Journal of Cognitive Neuroscience, 26(4):914-926, 2014.
- 13
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M. Chiew, S.M. Smith, P.J. Koopmans, N.N. Graedel, T. Blumensath, and K.L.
Miller.
k-t FASTER: Acceleration of FMRI data acquisition using low
rank constraints.
Magnetic Resonance in Medicine, 74(2):353-364, 2014.
- 14
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I.A. Clark, K.E. Niehaus, E.P. Duff, M.C. Di Simplicio, G.D. Clifford, S.M.
Smith, C.E. Mackay, M.W. Woolrich, and E.A. Holmes.
First steps in using machine learning on fMRI data to predict
intrusive memories of traumatic film footage.
Behaviour Research and Therapy, 62:37-46, 2014.
- 15
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F.A. Cowdrey, N. Filippini, R. Park, S. Smith, and C. McCabe.
Increased resting state functional connectivity in recovered anorexia
nervosa patients.
Human Brain Mapping, 35(2):483-91, 2014.
- 16
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G. Douaud, A.R. Groves, C.K. Tamnes, L.T. Westlye, E. Duff, A. Engvig, K.B.
Walhovd, A. James, A. Gass, A.U. Monsch, P.M. Matthews, A.M. Fjell, S.M.
Smith, and H. Johansen-Berg.
A common brain network links development, aging and vulnerability to
disease.
PNAS, 111(49):17648-17653, 2014.
- 17
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N. Filippini, E. Zsoldos, R. Haapakoski, C.E. Sexton, A. Mahmood, Allan C.L.,
A. Topiwala, V. Valkanova, E.J. Brunner, M.J. Shipley, E. Auerbach,
S. Moeller, K. Ugurbil, J. Xu, E. Yacoub, J. Andersson, J. Bijsterbosch,
S. Clare, L. Griffanti, A.T. Hess, M. Jenkinson, K.L. Miller,
G. Salimi-Khorshidi, S.N. Sotiropoulos, N.L. Voets, S.M. Smith, J.R. Geddes,
A. Singh-Manoux, C.E. Mackay, M. Kivimäki, and K.P. Ebmeier.
Study protocol: the Whitehall II imaging sub-study.
BMC Psychiatry, 14:159, 2014.
- 18
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L. Griffanti, G. Salimi-Khorshidi, C.F. Beckmann, E.J. Auerbach, G. Douaud,
C.E. Sexton, E. Zsoldos, K. Ebmeier, N. Filippini, C.E. Mackay, S. Moeller,
J.G. Xu, E. Yacoub, G. Baselli, K. Ugurbil, K.L. Miller, and S.M. Smith.
ICA-based artefact removal and accelerated fMRI acquisition for
improved resting state network imaging.
NeuroImage, 95:232-247, 2014.
- 19
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M. Mennes, M. Jenkinson, R. Valabregue, J.K. Buitelaar, C.F. Beckmann, and
S. Smith.
Optimizing full-brain coverage in human brain MRI through
population distributions of brain size.
NeuroImage, 98:513-520, 2014.
- 20
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E.C. Robinson, S. Jbabdi, M.F. Glasser, J. Andersson, G.C. Burgess, M.P. Harms,
S.M. Smith, D.C. Van Essen, and M. Jenkinson.
MSM: a new flexible framework for Multimodal Surface Matching.
NeuroImage, 100:414-426, 2014.
- 21
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G. Salimi-Khorshidi, G. Douaud, C.F. Beckmann, M.F. Glasser, L. Griffanti, and
S.M. Smith.
Automatic denoising of functional MRI data: Combining independent
component analysis and hierarchical fusion of classifiers.
NeuroImage, 90:449-468, 2014.
- 22
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S.M. Smith, A. Hyvärinen, G. Varoquaux, K.L. Miller, and C.F. Beckmann.
Group-PCA for very large fMRI datasets.
NeuroImage, 101:738-749, 2014.
- 23
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C. Stagg, V. Bachtiar, U. Amadi, C. Gudberg, A. Ilie, C. Sampaio-Baptista,
J. O'Shea, M. Woolrich, S. Smith, N. Fillipini, J. Near, and
H. Johansen-Berg.
Local GABA concentration is related to network-level resting
functional connectivity.
eLife, 3:e01465, 2014.
- 24
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A.M. Winkler, G.R. Ridgway, M.A. Webster, S.M. Smith, and T.E. Nichols.
Permutation inference for the general linear model.
NeuroImage, 92:381-397, 2014.
- 25
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D.M. Barch, G.C. Burgess, M.P. Harms, S.E. Petersen, B.L. Schlaggar,
M. Corbetta, M.F. Glasser, S. Curtiss, S. Dixit, C. Feldt, D. Nolan,
E. Bryant, T. Hartley, O. Footer, J.M. Bjork, R. Poldrack, S. Smith,
H. Johansen-Berg, A.Z. Snyder, and Van Essen, D. - for the WU-Minn HCP
Consortium.
Function in the Human Connectome: Task-fMRI and individual
differences in behavior.
NeuroImage, 80:169-189, 2013.
- 26
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T. Blumensath, S. Jbabdi, M.F. Glasser, D.C. Van Essen, K. Ugurbil, T.E.
Behrens, and S.M. Smith.
Spatially constrained hierarchical parcellation of the brain with
resting-state FMRI.
NeuroImage, 76:313-324, 2013.
- 27
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M. de Groot, M.W. Vernooij, S. Klein, A. Ikram, F.M. Vos, S.M. Smith, W.J.
Niessen, and J.L.R. Andersson.
Improving alignment in tract-based spatial statistics: evaluation and
optimization of image registration.
NeuroImage, 76:400-411, 2013.
- 28
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G. Douaud, R. Menke, A. Gass, A. Monsch, A. Rao, B. Whitcher, G. Zamboni,
P. Matthews, M. Sollberger, and S. Smith.
Brain microstructure reveals early abnormalities more than two years
prior to clinical progression from mild cognitive impairment to Alzheimer's
disease.
Journal of Neuroscience, 33(5):2147-2155, 2013.
- 29
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G. Douaud, H. Refsum, C.A. de Jager, R. Jacoby, T.E. Nichols, S.M. Smith, and
A.D. Smith.
Preventing Alzheimer's disease-related gray matter atrophy by
B-vitamin treatment.
PNAS, 110(23):9523-8, 2013.
- 30
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M.F. Glasser, S.N. Sotiropoulos, J.A. Wilson, T.S. Coalson, B. Fischl, J.L.
Andersson, J. Xu, S. Jbabdi, M. Webster, J.R. Polimeni, D.C. Van Essen, and
Jenkinson, M. - for the WU-Minn HCP Consortium.
The minimal preprocessing pipelines for the Human Connectome
Project.
NeuroImage, 80:105-124, 2013.
- 31
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A. Hyvärinen and S.M. Smith.
Pairwise likelihood ratios for estimation of non-Gaussian
structural equation models.
Journal of Machine Learning Research, 14:111-152, 2013.
- 32
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S. Jbabdi, S.N. Sotiropoulos, and T. E. Behrens.
The topographic connectome.
Current Opinion in Neurobiology, 23(2):207-15, 2013.
- 33
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S. Jbabdi, J.F. Lehman, S.N. Haber, and T. E. Behrens.
Human and monkey ventral prefrontal fibers use the same
organizational principles to reach their targets: tracing versus
tractography.
Journal of Neuroscience, 33(7):3190-201, 2013.
- 34
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L. Larson-Prior, R. Oostenveld, S. Della Penna, G. Michalareas, F. Prior,
A. Babajani-Feremi, J.-M. Schoffelen, L. Marzetti, F. de Pasquale,
F. Di Pompeo, J. Stout, M. Woolrich, Q. Luo, R. Bucholz, P. Fries,
V. Pizzella, G.L. Romani, M. Corbetta, and Snyder, A. - for the WU-Minn HCP
Consortium.
Adding dynamics to the Human Connectome Project with MEG.
NeuroImage, 80:190-201, 2013.
- 35
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D.S. Marcus, M.P. Harms, A.Z. Snyder, M. Jenkinson, J.A. Wilson, M.F. Glasser,
D.M. Barch, K.A. Archie, G.C. Burgess, M. Ramaratnam, M. Hodge, W. Horton,
R. Herrick, T. Olsen, M. McKay, M. House, M. Hileman, E. Reid, J. Harwell,
T. Coalson, J. Schindler, J. Elam, S.W. Curtiss, and Van Essen, D. - for the
WU-Minn HCP Consortium.
Human Connectome Project informatics: Quality control, database
services, and data visualization.
NeuroImage, 80:202-219, 2013.
- 36
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K.L. Ray, D.R. McKay, P.M. Fox, M.C. Riedel, A.M. Uecker, C.F. Beckmann, S.M.
Smith, P.T. Fox, and A. Laird.
ICA model order selection of task co-activation networks.
Frontiers in Systems Neuroscience, 7(237):1-12, 2013.
- 37
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S.M. Smith, J. Andersson, E.J. Auerbach, C.F. Beckmann, J. Bijsterbosch,
G. Douaud, E. Duff, D.A. Feinberg, L. Griffanti, M.P. Harms, M. Kelly,
T. Laumann, K.L. Miller, S. Moeller, S. Petersen, J. Power,
G. Salimi-Khorshidi, A.Z. Snyder, A. Vu, M.W. Woolrich, J. Xu, E. Yacoub,
K. Ugurbil, D.C. Van Essen, and Glasser, M. - for the WU-Minn HCP
Consortium.
Resting-state fMRI in the Human Connectome Project.
NeuroImage, 80:144-168, 2013.
- 38
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S.M. Smith, D. Vidaurre, C.F. Beckmann, M.F. Glasser, M. Jenkinson, K.L.
Miller, T.E. Nichols, E. Robinson, G. Salimi-Khorshidi, M.W. Woolrich, D.M.
Barch, K. Ugurbil, and D.C. Van Essen.
Functional connectomics from resting-state fMRI.
Trends in Cognitive Sciences, 17(12):666-682, 2013.
- 39
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S.N. Sotiropoulos, S. Jbabdi, J. Xu, J.L. Andersson, S. Moeller, E.J. Auerbach,
M.F. Glasser, M. Hernandez, G. Sapiro, M. Jenkinson, D. Feinberg, E. Yacoub,
C. Lenglet, D.C. Van Essen, K. Ugurbil, and Behrens, T. - for the WU-Minn
HCP Consortium.
Advances in diffusion MRI acquisition and processing in the Human
Connectome Project.
NeuroImage, 80:125-143, 2013.
- 40
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L. Tian, Y. Kong, J. Ren, G. Varoquaux, Y. Zang, and S. Smith.
Spatial vs. temporal features in ICA of resting-state fMRI - A
quantitative and qualitative investigation in the context of response
inhibition.
PLoS ONE, 8(6):e66572, 2013.
- 41
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K. Ugurbil, J. Xu, E.J. Auerbach, S. Moeller, A. Vu, J.M. Duarte-Carvajalino,
C. Lenglet, X. Wu, S. Schmitter, P.F. Van de Moortele, J. Strupp, G. Sapiro,
F. De Martino, D. Wang, N. Harel, M. Garwood, L. Chen, D.A. Feinberg, S.M.
Smith, K.L. Miller, S.N. Sotiropoulos, S. Jbabdi, J.L. Andersson, T.E.J.
Behrens, M.F. Glasser, D.C. Van Essen, and Yacoub, E. - for the WU-Minn HCP
Consortium.
Pushing spatial and temporal resolution for functional and diffusion
MRI in the Human Connectome Project.
NeuroImage, 80:80-104, 2013.
- 42
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D.C. Van Essen, S.M. Smith, D.M. Barch, T.E. Behrens, E. Yacoub, and Ugurbil,
K. - for the WU-Minn HCP Consortium.
The WU-Minn Human Connectome Project: An overview.
NeuroImage, 80:62-79, 2013.
- 43
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M. W. Woolrich and K. E. Stephan.
Biophysical network models and the human connectome.
Neuroimage, 80:330-338, Oct 2013.
- 44
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J. Xu, S. Moeller, E.J. Auerbach, J. Strupp, S.M. Smith, D.A. Feinberg,
E. Yacoub, and K. Ugurbil.
Evaluation of slice accelerations using multiband echo planar imaging
at 3 Tesla.
NeuroImage, 83:991-1001, 2013.
- 45
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G. Zamboni, G.K. Wilcock, G. Douaud, E. Drazich, E. McCulloch, N. Filippini,
I. Tracey, J.C.W. Brooks, S.M. Smith, M. Jenkinson, and C.E. Mackay.
Resting functional connectivity reveals residual functional activity
in Alzheimer's disease.
Biological Psychiatry, 74(5):375-83, 2013.
- 46
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M. Battaglini, M. Jenkinson, and N. De Stefano.
Evaluating and reducing the impact of white matter lesions on brain
volume measurements.
Human Brain Mapping, 33(9):2062-2071, 2012.
- 47
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C.F. Beckmann.
Modelling with independent components.
NeuroImage, 62:891-901, 2012.
- 48
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M.J. Donahue, H. Hoogduin, S.M. Smith, J.C.W. Siero, M. Chappell, N. Petridou,
P. Jezzard, P.R. Luijten, and J. Hendrikse.
Spontaneous BOLD fMRI signal is modulated by behavioral state and
correlates with evoked response in sensorimotor cortex: A 7.0 Tesla fMRI
study.
Human Brain Mapping, 33(3):511-522, 2012.
- 49
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E.P. Duff, A.J. Tractenberg, C.E. Mackay, M.A. Howard, F. Wilson, S.M. Smith,
and M.W. Woolrich.
Task-driven ICA feature generation for accurate and interpretable
prediction using FMRI.
NeuroImage, 60(1):189-203, 2012.
- 50
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N. Filippini, L.D. Nickerson, C.F. Beckmann, K.P. Ebmeier, G.B. Frisoni, P.M.
Matthews, S.M. Smith, and C.E. Mackay.
Age-related adaptations of brain function during a memory task are
also present at rest.
NeuroImage, 59(4):3821-3828, 2012.
- 51
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R. Gelineau-Morel, V. Tomassini, M. Jenkinson, H. Johansen-Berg, P. M.
Matthews, and J. Palace.
The effect of hypointense white matter lesions on automated gray
matter segmentation in multiple sclerosis.
Hum Brain Mapp, 33(12):2802-14, 2012.
- 52
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A.R. Groves, S.M. Smith, A.M. Fjell, C.K. Tamnes, K.B. Walhovd, G. Douaud, M.W.
Woolrich, and L.T. Westlye.
Benefits of multi-modal fusion analysis on a large-scale dataset:
Life-span patterns of inter-subject variability in cortical morphometry and
white matter microstructure.
NeuroImage, 63(1):365-380, 2012.
- 53
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M.J. Hawrylycz, E.S. Lein, A.L. Guillozet-Bongaarts, E.H. Shen, L. Ng, J.A.
Miller, L.N. van de Lagemaat, K.A. Smith, A. Ebbert, Z.L. Riley, C. Abajian,
C.F. Beckmann, A. Bernard, D. Bertagnolli, A.F. Boe, P.M. Cartagena, M.M.
Chakravarty, M. Chapin, J. Chong, R.A. Dalley, B.D. Daly, C. Dang, S. Datta,
N. Dee, T.A. Dolbeare, V. Faber, D. Feng, D.R. Fowler, J. Goldy, B.W. Gregor,
Z. Haradon, D.R. Haynor, J.G. Hohmann, S. Horvath, R.E. Howard, A. Jeromin,
J.M. Jochim, M. Kinnunen, C. Lau, E.T. Lazarz, C. Lee, T.A. Lemon, L. Li,
Y. Li, J.A. Morris, C.C. Overly, P.D. Parker, S.E. Parry, M. Reding, J.J.
Royall, J. Schulkin, P.A. Sequeira, C.R. Slaughterbeck, S.C. Smith, A.J.
Sodt, S. Sunkin, B.E. Swanson, M.P. Vawter, D. Williams, P. Wohnoutka, H.R.
Zielke, D.H. Geschwind, P.R. Hof, S.M. Smith, C. Koch, S.G.N. Grant, and A.R.
Jones.
An anatomically comprehensive atlas of the adult human brain
transcriptome.
Nature, 489:391-399, 2012.
- 54
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S. Jbabdi, Stamatios N. Sotiropoulos, Alexander M. Savio, Manuel Grana, and
T. E. Behrens.
Model-based analysis of multishell diffusion MR data for
tractography: How to get over fitting problems.
Magnetic Resonance in Medicine, 68(6):1846-55, 2012.
- 55
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S. Jbabdi and T. E. Behrens.
Specialization: The connections have it.
Nature Neuroscience, 15(2):171-172, 2012.
- 56
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M. Jenkinson, C.F. Beckmann, T.E.J. Behrens, M.W. Woolrich, and S.M. Smith.
FSL.
NeuroImage, 62:782-790, 2012.
- 57
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S.M. Smith, P.A. Bandettini, K.L. Miller, T.E.J. Behrens, K.J. Friston,
O. David, T. Liu, M.W. Woolrich, and T.E. Nichols.
The danger of systematic bias in group-level FMRI-lag-based
causality estimation.
NeuroImage, 59:1228-9, 2012.
- 58
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S.M. Smith.
The future of FMRI connectivity.
NeuroImage, 62:1257-1266, 2012.
- 59
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S.M. Smith, K.L. Miller, S. Moeller, J. Xu, E.J. Auerbach, M.W. Woolrich, C.F.
Beckmann, M. Jenkinson, J. Andersson, M.F. Glasser, D. Van Essen,
D. Feinberg, E. Yacoub, and K. Ugurbil.
Temporally-independent functional modes of spontaneous brain
activity.
Proc Natl Acad Sci USA (PNAS), 109(8):3131-6, 2012.
- 60
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M. Tondelli, G.K. Wilcock, P. Nichelli, C.A. De Jager, M. Jenkinson, and
G. Zamboni.
Structural MRI changes detectable up to ten years before clinical
Alzheimer's disease.
Neurobiology of Aging, 33(4):825.e25-825.e36, 2012.
- 61
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A.J. Trachtenberg, N. Filippini, K.P. Ebmeier, S.M. Smith, F. Karpe, and C.E.
Mackay.
The effects of APOE on the functional architecture of the resting
brain.
NeuroImage, 59(1):565-572, 2012.
- 62
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D.C. Van Essen, K. Ugurbil, E. Auerbach, D. Barch, T.E.J. Behrens, R. Bucholz,
A. Chang, L. Chen, M. Corbetta, S.W. Curtiss, S. Della Penna, D. Feinberg,
M.F. Glasser, N. Harel, A.C. Heath, L. Larson-Prior, D. Marcus,
G. Michalareas, S. Moeller, R. Oostenveld, S.E. Petersen, F. Prior, B.L.
Schlaggar, S.M. Smith, A.Z. Snyder, J. Xu, E. Yacoub, and WU-Minn HCP
Consortium.
The Human Connectome Project: A data acquisition perspective.
NeuroImage, 62(4):2222-2231, 2012.
- 63
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K. Wartolowska, M. G. Hough, M. Jenkinson, J. Andersson, B. P. Wordsworth, and
I. Tracey.
Structural brain changes in rheumatoid arthritis.
Arthritis Rheum, 64(2):371-379, 2012.
- 64
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K.E. Watkins, A. Cowey, A. Alexander, N. Fillipini, J. Kennedy, S.M. Smith,
N. Ragge, and H. Bridge.
Language networks in anophthalmia: maintained hierarchy of processing
in `visual' cortex.
Brain, 135(5):1566-1577, 2012.
- 65
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M.W. Woolrich.
Bayesian inference in FMRI.
NeuroImage, 62:801-810, 2012.
- 66
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C.A. Bishop, M. Jenkinson, J. Declerck, and D. Merhof.
Novel fast marching for automated segmentation of the hippocampus
(fmash): Method and validation on clinical data.
NeuroImage, 55(3):1009-1019, 2011.
- 67
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M.J. Brookes, M.W. Woolrich, H. Luckhoo, D. Price, J.R. Hale, M.C. Stephenson,
G.R. Barnes, S.M. Smith, and P.G. Morris.
Investigating the electrophysiological basis of resting state
networks using magnetoencephalography.
Proc Natl Acad Sci USA (PNAS), 108(40):16783-16788, 2011.
- 68
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G. Douaud, S. Jbabdi, T. Behrens, R. Menke, A. Gass, A. Monsch, A. Rao,
B. Whitcher, G. Kindlmann, P. Matthews, and S. Smith.
DTI measures in crossing-fibre areas: Increased diffusion
anisotropy reveals early white matter alteration in MCI and mild
Alzheimer's disease.
NeuroImage, 55(3):880-890, 2011.
- 69
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N. Filippini, K.P. Ebmeier, B.J. MacIntosh, A.J. Trachtenberg, G.B. Frisoni,
G.K. Wilcock, C.F. Beckmann, S.M. Smith, P.M. Matthews, and C.E. Mackay.
Differential effects of the APOE genotype on brain function across
the lifespan.
NeuroImage, 54(1):602-610, 2011.
- 70
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A.R. Groves, C.F. Beckmann, S.M. Smith, and M.W. Woolrich.
Linked independent component analysis for multimodal data fusion.
NeuroImage, 54(3):2198-2217, 2011.
- 71
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ZT Kincses, S. Ropele, M. Jenkinson, M. Khalil, K. Petrovic, M. Loitfelder,
C. Langkammer, E. Aspeck, M. Wallner-Blazek, S. Fuchs, et al.
Lesion probability mapping to explain clinical deficits and cognitive
performance in multiple sclerosis.
Multiple Sclerosis Journal, 17(6):681-689, 2011.
- 72
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A.R. Laird, P.M. Fox, S.B. Eickhoff, J.A. Turner, K.L. Ray, D.R. McKay, D.C.
Glahn, C.F. Beckmann, S.M. Smith, and P.T. Fox.
Behavioral interpretations of intrinsic connectivity networks.
Journal of Cognitive Neuroscience, 23(12):4022-4037, 2011.
- 73
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R. Leech, S. Kamourieh, C.F. Beckmann, and D.J. Sharp.
Fractionating the default mode network: Distinct contributions of the
ventral and dorsal posterior cingulate cortex to cognitive control.
The Journal of Neuroscience, 31(9):3217-3224, 2011.
- 74
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D.S. Marcus, J. Harwell, T. Olsen, M. Hodge, M.F. Glasser, F. Prior,
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Integrating temporal information with a non-rigid method of motion
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Image and Vision Computing, 25(3):311-320, 2007.
- 156
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A.J. Bartsch, G. Homola, A. Biller, S.M. Smith, H-G. Weijers, G.A. Wiesbeck,
M. Jenkinson, N. De Stefano, L. Solymosi, and M. Bendszus.
Manifestations of early brain recovery associated with abstinence
from alcoholism.
Brain, 130(1):36-47, 2007.
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A.J. Bartsch, G.H. Homola, S. Thesen, P. Sahmer, R. Keim, C.F. Beckmann,
A. Biller, C. Knaus, and M. Bendszus.
Scanning for the scanner: FMRI of audition by read-out omissions
from echo-planar imaging.
NeuroImage, 35(1):234-243, 2007.
- 158
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T.E.J. Behrens, H. Johansen-Berg, S. Jbabdi, M.F.S. Rushworth, and M.W.
Woolrich.
Probabilistic diffusion tractography with multiple fibre
orientations. What can we gain?
NeuroImage, 23:144-155, 2007.
- 159
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T. E. Behrens, M. W. Woolrich, M. E. Walton, and M. F. Rushworth.
Learning the value of information in an uncertain world.
Nat. Neurosci., 10:1214-1221, 2007.
- 160
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S. Cader, H. Johansen-Berg, M. Wylezinska, J. Palace, T.E. Behrens, S. Smith,
and P.M. Matthews.
Discordant white matter N-acetylasparate and diffusion MRI
measures suggest that chronic metabolic dysfunction contributes to axonal
pathology in multiple sclerosis.
NeuroImage, 36(1):19-27, 2007.
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N. De Stefano, M. Battaglini, and S.M. Smith.
Measuring brain atrophy in multiple sclerosis.
J Neuroimaging, 17s1:10-15S, 2007.
- 162
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G. Douaud, S. Smith, M. Jenkinson, T. Behrens, H. Johansen-Berg, J. Vickers,
S. James, N. Voets, K. Watkins, P.M. Matthews, and A. James.
Anatomically-related grey and white matter abnormalities in
adolescent-onset schizophrenia.
Brain, 130:2375-2386, 2007.
- 163
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B. Jasperse, P. Valsasina, V. Neacsu, D.L. Knol, N. De Stefano, C. Enzinger,
S.M. Smith, S. Ropele, T. Korteweg, A. Giorgio, V. Anderson, C.H. Polman,
M. Filippi, D.H. Miller, M. Rovaris, F. Barkhof, H. Vrenken, and MAGNIMS.
Inter-center agreement of brain atrophy measurement in Multiple
Sclerosis patients using manually edited SIENAX and SIENA.
Journal of Magnetic Resonance Imaging, 26:881-885, 2007.
- 164
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B. Jasperse, H. Vrenken, E. Sanz-Arigita, V. de Groot, S.M. Smith, C.H. Polman,
and F. Barkhof.
Regional brain atrophy development is related to specific aspects of
clinical dysfunction in Multiple Sclerosis.
NeuroImage, 38(3):529-537, 2007.
- 165
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S. Jbabdi, M.W. Woolrich, J.L. Andersson, and T.E.J. Behrens.
A Bayesian framework for global tractography.
NeuroImage, 37(1):116-129, 2007.
- 166
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H. Johansen-Berg, V. Della-Maggiore, T.E.J. Behrens, S.M. Smith, and T. Paus.
Integrity of white matter in the corpus callosum correlates with
bimanual co-ordination skills.
NeuroImage, 36 Supp. 2:T16-21, 2007.
- 167
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J. Klein, T.E.J. Behrens, C.E. Mackay, M.D. Robson, and H. Johansen-Berg.
Connectivity-based parcellation of human cortex using diffusion
MRI: Establishing reproducibility, validity and observer-independence in
BA 44/45 and SMA/pre-SMA.
NeuroImage, 34(1):204-211, 2007.
- 168
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P. Kochunov, P.M. Thompson, J.L. Lancaster, G. Bartzokis, S. Smith, T. Coyle,
D.R. Royall, A. Laird, and P.T. Fox.
Relationship between white matter fractional anisotropy and other
indices of cerebral health in normal aging: Tract-Based Spatial Statistics
study of aging.
NeuroImage, 35(2):478-487, 2007.
- 169
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K.L. Miller, S.M. Smith, P. Jezzard, G.C. Wiggins, and C.J. Wiggins.
Signal and noise characteristics of SSFP FMRI: A comparison with
GRE at multiple field strengths.
NeuroImage, 37:1227-1236, 2007.
- 170
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K.L. Miller, D.P. Bulte, H. Devlin, M.D. Robson, R.G. Wise, M.W. Woolrich,
P. Jezzard, and T.E.J. Behrens.
Evidence for a vascular contribution to diffusion FMRI at high
b-value.
Proc Natl Acad Sci USA (PNAS), 104:20967-20972, 2007.
- 171
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S.M. Smith, M. Jenkinson, C.F. Beckmann, K.L. Miller, and M. Woolrich.
Meaningful design and contrast estimability in FMRI.
NeuroImage, 34(1):127-136, 2007.
- 172
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S.M. Smith, H. Johansen-Berg, M. Jenkinson, D. Rueckert, T.E. Nichols, K.L.
Miller, M.D. Robson, D.K. Jones, J.C. Klein, A.J. Bartsch, and T.E.J.
Behrens.
Acquisition and voxelwise analysis of multi-subject diffusion data
with Tract-Based Spatial Statistics.
Nature Protocols, 2(3):499-503, 2007.
- 173
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S.M. Smith, A. Rao, N. De Stefano, M. Jenkinson, J.M. Schott, P.M. Matthews,
and N.C. Fox.
Longitudinal and cross-sectional analysis of atrophy in Alzheimer's
disease: Cross-validation of BSI, SIENA and SIENAX.
NeuroImage, 36(4):1200-1206, 2007.
- 174
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M.E. Walton, P.L. Croxson, T.E.J. Behrens, S.W. Kennerley, and M.F.S Rushworth.
Adaptive decision making and value in the anterior cingulate cortex.
NeuroImage, 36 Supp. 2:T142-154, 2007.
- 175
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M. Zarei, H. Johansen-Berg, M. Jenkinson, O. Ciccarelli, A.J. Thompson, and
P.M. Matthews.
Two-dimensional population map of cortical connections in the human
internal capsule.
Journal of Magnetic Resonance Imaging, 25(1):48-54, 2007.
- 176
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C.F. Beckmann, M.J. Jenkinson, M.W. Woolrich, T.E.J. Behrens, D.E. Flitney,
J.T. Devlin, and S.M. Smith.
Applying FSL to the FIAC data: Model-based and model-free
analysis of voice and sentence repetition priming.
Human Brain Mapping, 27:380-391, 2006.
- 177
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T.E.J. Behrens, M. Jenkinson, M.D. Robson, S.M. Smith, and H. Johansen-Berg.
A consistent relationship between local white matter architecture and
functional specialisation in medial frontal cortex.
NeuroImage, 30(1):220-227, 2006.
- 178
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J.S. Damoiseaux, S.A.R.B. Rombouts, F. Barkhof, P. Scheltens, C.J. Stam, S.M.
Smith, and C.F. Beckmann.
Consistent resting-state networks across healthy subjects.
Proc Natl Acad Sci USA, 103(37):13848-13853, 2006.
- 179
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I. Drobnjak, D. Gavaghan, E. Suli, J. Pitt-Francis, and M. Jenkinson.
Development of a functional magnetic resonance imaging simulator for
modelling realistic rigid-body motion artifacts.
Magnetic Resonance in Medicine, 56(2):364-380, 2006.
- 180
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C. Enzinger, S. Smith, F. Fazekas, G. Drevin, S. Ropele, T. Nichols,
T. Behrens, R. Schmidt, and P.M. Matthews.
Lesion probability maps of white matter hyperintensities in elderly
individuals.
Journal of Neurology, 253(8):1064-70, 2006.
- 181
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E. Heiervang, T.E.J. Behrens, C.E. Mackay, M.D. Robson, and H. Johansen-Berg.
Between session reproducibility and between subject variability of
diffusion MR and tractography measures.
NeuroImage, 33(3):867-877, 2006.
- 182
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S.W. Kennerley, M.E. Walton, T.E.J Behrens, M.J. Buckley, and M.F.S. Rushworth.
Optimal decision making and the anterior cingulate cortex.
Nature Neuroscience, 9(7):940-947, 2006.
- 183
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S. D. Mayhew, G. D. Iannetti, M. W. Woolrich, and R. G. Wise.
Automated single-trial measurement of amplitude and latency of
laser-evoked potentials (LEPs) using multiple linear regression.
Clin Neurophysiol, 117:1331-1344, Jun 2006.
- 184
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K.L. Miller, S.M. Smith, P. Jezzard, and J.M. Pauly.
High-resolution FMRI at 1.5T using balanced SSFP.
Magnetic Resonance in Medicine, 55(1):161-170, 2006.
- 185
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S.M. Smith, M. Jenkinson, H. Johansen-Berg, D. Rueckert, T.E. Nichols, C.E.
Mackay, K.E. Watkins, O. Ciccarelli, M.Z. Cader, P.M. Matthews, and T.E.J.
Behrens.
Tract-based spatial statistics: Voxelwise analysis of multi-subject
diffusion data.
NeuroImage, 31:1487-1505, 2006.
- 186
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G. Winterer, F. Musso, C.F. Beckmann, V. Mattay, M.F. Egan, D.W. Jones, J.H.
Callicott, R. Coppola, and D.R. Weinberger.
Instability of prefrontal signal processing in schizophrenia.
American Journal of Psychiatry, 163:1960-1968, 2006.
- 187
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M. Woolrich, P. Chiarelli, J. Perthen, and T.T. Liu.
Bayesian inference of haemodynamic changes in functional ASL data.
Magnetic Resonance in Medicine, 56:891-906, 2006.
- 188
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M. Woolrich and T. Behrens.
Variational Bayes inference of spatial mixture models for
segmentation.
IEEE Trans. on Medical Imaging, 25(10):1380-1391, 2006.
- 189
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M. Zarei, H. Johansen-Berg, S. Smith, O. Ciccarelli, A.J. Thompson, and P.M.
Matthews.
Functional anatomy of interhemispheric cortical connections in the
human brain.
J Anat., 209:311-320, 2006.
- 190
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C.F. Beckmann and S.M. Smith.
Tensorial extensions of independent component analysis for
multisubject FMRI analysis.
NeuroImage, 25(1):294-311, 2005.
- 191
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C.F. Beckmann, M. De Luca, J.T. Devlin, and S.M. Smith.
Investigations into resting-state connectivity using independent
component analysis.
Philosophical Transactions of the Royal Society,
360(1457):1001-1013, 2005.
- 192
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T.E.J. Behrens and H. Johansen-Berg.
Relating connectional architecture to grey matter function using
diffusion imaging.
Philosophical Transactions of the Royal Society B,
360:903-911, 2005.
- 193
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H. Bridge, S. Clare, M. Jenkinson, P. Jezzard, A.J. Parker, and P.M. Matthews.
Independent anatomical and functional measures of the V1/V2
boundary in human visual cortex.
Journal of Vision, 5(2):93-102, 2005.
- 194
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S.P. David, M.R. Munafò, H. Johansen-Berg, S.M. Smith, R.D. Rogers, P.M.
Matthews, and R.T. Walton.
Ventral striatum/nucleus accumbens activation to smoking-related
pictorial cues in smokers and nonsmokers: A functional magnetic resonance
imaging study.
Biol Psychiatry, 58:488-494, 2005.
- 195
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M. De Luca, C.F. Beckmann, N. De Stefano, P.M. Matthews, and S.M. Smith.
FMRI resting state networks define distinct modes of long-distance
interactions in the human brain.
NeuroImage, 29(4):1359-1367, 2005.
- 196
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M. De Luca, S. Smith, N. De Stefano, A. Federico, and P.M. Matthews.
Blood oxygenation level dependent contrast resting state networks are
relevant to functional activity in the neocortical sensorimotor system.
Experimental Brain Research, 167(4):587-594, 2005.
- 197
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C. Enzinger, F. Fazekas, P.M. Matthews, S. Ropele, H. Schmidt, S. Smith, and
R. Schmidt.
Risk factors for progression of brain atrophy in aging. Six-year
follow-up of normal subjects.
Neurology, 64:1704-1711, 2005.
- 198
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G.D. Iannetti, R.K. Niazy, R.G. Wise, P. Jezzard, J.C.W. Brooks, L. Zambreanu,
W. Vennart, P.M. Matthews, and I. Tracey.
Simultaneous recording of laser-evoked brain potentials and
continuous, high-field functional magnetic resonance imaging in humans.
NeuroImage, 28(3):708-719, 2005.
- 199
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H. Johansen-Berg, T.E.J Behrens, E.L. Sillery, O. Ciccarelli, C.A.M.
Wheeler-Kingshott, A.J. Thompson, S.M. Smith, and P.M. Matthews.
Functional-anatomical validation and individual variation of
diffusion tractography-based segmentation of the human thalamus.
Cerebral Cortex, 15:31-39, 2005.
- 200
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R.K. Niazy, C.F. Beckmann, G.D. Iannetti, J.M. Brady, and S.M. Smith.
Removal of FMRI environment artifacts from EEG data using optimal
basis sets.
NeuroImage, 28(3):720-737, November 2005.
- 201
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C.N.L. Olivers, S. Smith, P. Matthews, and G.W. Humphreys.
Prioritizing new over old: An fMRI study of the preview search
task.
Human Brain Mapping, 24(1):69-78, 2005.
- 202
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R.A. Osterbauer, P.M. Matthews, M. Jenkinson, C.F. Beckmann, P.C. Hansen, and
G.A. Calvert.
The color of scents: chromatic stimuli modulate odor responses in the
human brain.
Journal of Neurophysiology, 93(6):3434-3441, February 2005.
- 203
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R. Schmidt, S. Ropele, C. Enzinger, K. Petrovic, S. Smith, H. Schmidt, P.M.
Matthews, and F. Fazekas.
White matter lesion progression, brain atrophy, and cognitive
decline: The Austrian stroke prevention study.
Annals of Neurology, 58(4):610-616, October 2005.
- 204
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S.M. Smith, C.F. Beckmann, N. Ramnani, M.W. Woolrich, P.R. Bannister,
M. Jenkinson, P.M. Matthews, and D.J. McGonigle.
Variability in FMRI: A re-examination of intersession differences.
Human Brain Mapping, 24:248-257, 2005.
- 205
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M.W. Woolrich, T.E.J. Behrens, C.F. Beckmann, and S.M. Smith.
Mixture models with adaptive spatial regularisation for segmentation
with an application to FMRI data.
IEEE Trans. on Medical Imaging, 24(1):1-11, 2005.
- 206
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C.F. Beckmann and S.M. Smith.
Probabilistic independent component analysis for functional magnetic
resonance imaging.
IEEE Trans. on Medical Imaging, 23(2):137-152, 2004.
- 207
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J.T. Chen, S. Narayanan, D.L. Collins, S.M. Smith, P.M. Matthews, and D.L.
Arnold.
Relating neocortical pathology to disability progression in multiple
sclerosis using MRI.
NeuroImage, 23(3):1168-1175, 2004.
- 208
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C. Enzinger, S. Ropele, S. Smith, S. Strasser-Fuchs, B. Poltrum, H. Schmidt,
P.M. Matthews, and F. Fazekas.
Accelerated evolution of brain atrophy and black holes in MS
patients with APOE-e4.
Annals of Neurology, 55(4):563-569, 2004.
- 209
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M. Filippi, M. Rovaris, M. Inglese, F. Barkhof, N. De Stefano, S. Smith, and
P.G. Comi.
Interferon beta-1a for brain tissue loss in patients at presentation
with syndromes suggestive of multiple sclerosis: A randomised, double-blind,
placebo-controlled trial.
Lancet, 364(9444):1489-1496, 2004.
- 210
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S.M. Gobel, H. Johansen-Berg, T.E.J. Behrens, and M.F.S. Rushworth.
Parietal activation during number comparison is not number specific.
J Cogn Neurosci., 16:1536-51, 2004.
- 211
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M. Jenkinson, J. Wilson, and P. Jezzard.
A perturbation method for magnetic field calculations of
non-conductive objects.
Magnetic Resonance in Medicine, 52(3):471-477, 2004.
- 212
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H. Johansen-Berg, T.E.J. Behrens, M.D. Robson, I. Drobnjak, M.F.S. Rushworth,
J.M. Brady, S.M. Smith, D.J. Higham, and P.M. Matthews.
Changes in connectivity profiles define functionally distinct
regions in human medial frontal cortex.
Proc Natl Acad Sci U S A, 101(36):13335-13340, 2004.
- 213
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Narender Ramnani, Timothy E J Behrens, Will Penny, and Paul M Matthews.
New approaches for exploring anatomical and functional connectivity
in the human brain.
Biol Psychiatry, 56(9):613-619, Nov 2004.
- 214
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R.D. Rogers, N. Ramnani, C. Mackay, J.L. Wilson, P. Jezzard, C.S. Carter, and
S.M. Smith.
Distinct portions of anterior cingulate cortex and medial prefrontal
cortex are activated by reward processing in separable phases of
decision-making cognition.
Biological Psychiatry, 55(6):594-602, March 2004.
- 215
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S. Saini, N. De Stefano, S. Smith, L. Guidi, M.P. Amato, A. Federico, and P.M.
Matthews.
Altered cerebellar functional connectivity mediates potential
adaptive plasticity in patients with multiple sclerosis.
Journal of Neurology Neurosurgery and Psychiatry, 75:840-846,
2004.
- 216
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S.M. Smith, M. Jenkinson, M.W. Woolrich, C.F. Beckmann, T.E.J. Behrens,
H. Johansen-Berg, P.R. Bannister, M. De Luca, I. Drobnjak, D.E. Flitney,
R. Niazy, J. Saunders, J. Vickers, Y. Zhang, N. De Stefano, J.M. Brady, and
P.M. Matthews.
Advances in functional and structural MR image analysis and
implementation as FSL.
NeuroImage, 23(S1):208-219, 2004.
- 217
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S.M. Smith.
Overview of fMRI analysis.
British Journal of Radiology, 77:S167-175, 2004.
- 218
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M.W. Woolrich, M. Jenkinson, J.M. Brady, and S.M. Smith.
Fully Bayesian spatio-temporal modelling of FMRI data.
IEEE Trans. on Medical Imaging, 23(2):213-231, 2004.
- 219
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M.W. Woolrich, T.E.J. Behrens, C.F. Beckmann, M. Jenkinson, and S.M. Smith.
Multi-level linear modelling for FMRI group analysis using
Bayesian inference.
NeuroImage, 21(4):1732-1747, 2004.
- 220
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M.W. Woolrich, T.E.J. Behrens, and S.M. Smith.
Constrained linear basis sets for HRF modelling using Variational
Bayes.
NeuroImage, 21(4):1748-1761, 2004.
- 221
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C.F. Beckmann, M. Jenkinson, and S.M. Smith.
General multi-level linear modelling for group analysis in FMRI.
NeuroImage, 20:1052-1063, 2003.
- 222
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T.E.J. Behrens, H. Johansen-Berg, M.W. Woolrich, S.M. Smith, C.A.M.
Wheeler-Kingshott, P.A. Boulby, G.J. Barker, E.L. Sillery, K. Sheehan,
O. Ciccarelli, A.J. Thompson, J.M. Brady, and P.M. Matthews.
Non-invasive mapping of connections between human thalamus and cortex
using diffusion imaging.
Nature Neuroscience, 6(7):750-757, 2003.
- 223
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T.E.J. Behrens, M.W. Woolrich, M. Jenkinson, H. Johansen-Berg, R.G. Nunes,
S. Clare, P.M. Matthews, J.M. Brady, and S.M. Smith.
Characterization and propagation of uncertainty in
diffusion-weighted MR imaging.
Magn Reson Med, 50(5):1077-1088, 2003.
- 224
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N. De Stefano, P.M Matthews, M. Filippi, F. Agosta, M. De Luca, M.L.
Bartolozzi, L. Guidi, A. Ghezzi, E. Montanari, A. Cifelli, A. Federico, and
S.M. Smith.
Evidence of early cortical atrophy in MS.
Neurology, 60:1157-1162, 2003.
- 225
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J. T. Devlin, J. Raley, E. Tunbridge, K. Lanary, A. Floyer-Lea, C. Narain,
I. Cohen, T.E.J Behrens, P. Jezzard, P. M. Matthews, and D. R. Moore.
Functional asymmetry for auditiory processing in human primary
auditory cortex.
J Neurosci., 23(37):11516-11522, 2003.
- 226
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M. Jenkinson.
A fast, automated, n-dimensional phase unwrapping algorithm.
Magnetic Resonance in Medicine, 49(1):193-197, 2003.
- 227
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H. Johansen-Berg.
Motor physiology: a brain of two halves,.
Current Biology, 13:R802-804, 2004.
- 228
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J.L. Marchini and S.M. Smith.
On bias in the estimation of autocorrelations for fMRI voxel
time-series analysis.
NeuroImage, 18(1):83-90, 2003.
- 229
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P.M. Matthews, J. Adcock, Y. Chen, S. Fu, J.T. Devlin, M.F.S. Rushworth,
S. Smith, C. Beckmann, and S. Iversen.
Towards understanding language organisation in the brain using
fMRI.
Human Brain Mapping, 18(3):239-247, 2003.
- 230
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A. Parry, S. Clare, M. Jenkinson, S.M. Smith, J. Palace, and P.M. Matthews.
MRI brain T1 relaxation time changes in MS patients increase
over time in both the white matter and the cortex.
Journal of Neuroimaging, 13(3):234-9, 2003.
- 231
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A.M.M. Parry, R.B. Scott, J. Palace, S. Smith, and P.M. Matthews.
Potentially adaptive functional changes in cognitive processing for
patients with multiple sclerosis and their acute modulation by rivastigmine.
Brain, 126(12):2750-2760, 2003.
- 232
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N. Walters, G. Egan, J.J. Kril, M. Kean, P. Waley, M. Jenkinson, and J.D.
Watson.
In vivo identification of human cortical areas using high-resolution
mri: an approach to cerebral structure-function correlation.
Proc Natl Acad Sci USA (PNAS), 100(5):2981-6, 2003.
- 233
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J. L. Wilson, M. Jenkinson, and P. Jezzard.
Protocol to determine the optimal intra-oral passive shim for
minimization of susceptibility artifact in human inferior frontal cortex.
NeuroImage, 19(4):1802-1811, 2003.
- 234
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S.J. Bantick, R.G. Wise, A. Ploghaus, S. Clare, S.M. Smith, and I. Tracey.
Imaging how attention modulates pain in humans using functional
MRI.
Brain, 125(2):310-319, 2002.
- 235
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Y. Chen, S. Fu, S.D. Iversen, S.M. Smith, and P.M. Matthews.
Testing for dual brain processing routes in reading: A direct
contrast of Chinese character and Pinyin reading using fMRI.
Journal of Cognitive Neuroscience, 14(7):1088-1098, 2002.
- 236
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N. De Stefano, S. Narayanan, S.J. Francis, S. Smith, M. Mortilla, M.L.
Tartaglia, M.C. Bartolozzi, L. Guidi, A. Federico, and D.L. Arnold.
Diffuse axonal and tissue injury in patients with multiple sclerosis
with low cerebral lesion load and no disability.
Arch. Neurol., 59(10):1565-71, 2002.
- 237
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S. Fu, Y. Chen, S. Smith, S. Iversen, and P. Matthews.
Effects of word form on brain processing of written chinese.
NeuroImage, 17:1538-1548, 2002.
- 238
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D. Hall, M. Gonçalves, S. Smith, P. Jezzard, M. Haggard, and J. Kornak.
A method for determining venous contribution to BOLD contrast
functional activation.
Magnetic Resonance Imaging, 20(10):695-706, 2002.
- 239
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M. Jenkinson, P.R. Bannister, J.M. Brady, and S.M. Smith.
Improved optimisation for the robust and accurate linear registration
and motion correction of brain images.
NeuroImage, 17(2):825-841, 2002.
- 240
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M. Jenkinson and J. M Brady.
A saliency-based hierarchy for local symmetries.
Image and Vision Computing, 20(2):85-101, 2002.
- 241
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H. Johansen-Berg, H. Dawes, C. Guy, S.M. Smith, D.T. Wade, and P.M. Matthews.
Correlation between motor improvements and altered fMRI activity
after rehabilitive therapy.
Brain, 125:2731--42, 2002.
- 242
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A.C.H. Lee, T.W. Robbins, S. Smith, G.A. Calvert, I. Tracey, P. Matthews, and
A.M. Owen.
Evidence for asymmetric frontal-lobe involvement in episodic memory
from functional magnetic resonance imaging and patients with unilateral
frontal-lobe excisions.
Neuropsychologia, 40(13):2420-2437, 2002.
- 243
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A. Parry, A. Clare, M. Jenkinson, S. Smith, J. Palace, and P.M. Matthews.
White matter and lesion T1 relaxation times increase in parallel
and correlate with disability in multiple sclerosis.
Journal of Neurology, 249(9):1279-1286, June 2002.
- 244
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S.M. Smith, Y. Zhang, M. Jenkinson, J. Chen, P.M. Matthews, A. Federico, and
N. De Stefano.
Accurate, robust and automated longitudinal and cross-sectional brain
change analysis.
NeuroImage, 17(1):479-489, 2002.
- 245
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S.M. Smith.
Fast robust automated brain extraction.
Human Brain Mapping, 17(3):143-155, November 2002.
- 246
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K.A. Smith, A. Ploghaus, P. Cowen, J.M. McCleery, G.M. Goodwin, S. Smith,
I. Tracey, and P.M. Matthews.
Cerebellar responses during anticipation of noxious stimuli in
subjects recovered from depression.
British Journal of Psychiatry, 181:411-415, 2002.
- 247
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V.L. Stevenson, S.M. Smith, P.M. Matthews, D.H. Miller, and A.J. Thompson.
Monitoring disease activity and progression in primary progressive
multiple sclerosis using MRI: sub-voxel registration to identify lesion
changes and to detect cerebral atrophy.
Journal of Neurology, 249(2):171-177, 2002.
- 248
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I. Tracey, A. Ploghaus, J.S. Gati, S. Clare, S. Smith, R.S. Menon, and P.M.
Matthews.
Imaging attentional modulation of pain in the periaqueductal gray in
humans.
Journal of Neuroscience, 22(7):2748-2752, 2002.
- 249
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J. L. Wilson, M. Jenkinson, I. de Araujo, M. L. Kringelbach, E . T. Rolls, and
P. Jezzard.
Fast, fully automated global and local magnetic field optimisation
for fmri of the human brain.
NeuroImage, 17(2):967-976, 2002.
- 250
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J. Wilson, M. Jenkinson, and P. Jezzard.
Optimisation of static field homogeneity in human brain using
diamagnetic passive shims.
Magnetic Resonance in Medicine, 48:906-914, 2002.
- 251
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N. Evangelou, D. Konz, M.M. Esiri, S. Smith, J. Palace, and P.M. Matthews.
Size-selective neuronal changes in the anterior optic pathways
suggest a differential susceptibility to injury in multiple sclerosis.
Brain, 124(9):1813-1820, 2001.
- 252
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M. Jenkinson and S.M. Smith.
A global optimisation method for robust affine registration of brain
images.
Medical Image Analysis, 5(2):143-156, 2001.
- 253
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S.M. Smith, N. De Stefano, M. Jenkinson, and P.M. Matthews.
Normalised accurate measurement of longitudinal brain change.
Journal of Computer Assisted Tomography, 25(3):466-475,
May/June 2001.
- 254
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M.W. Woolrich, B.D. Ripley, J.M. Brady, and S.M. Smith.
Temporal autocorrelation in univariate linear modelling of FMRI
data.
NeuroImage, 14(6):1370-1386, 2001.
- 255
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Y. Zhang, M. Brady, and S. Smith.
Segmentation of brain MR images through a hidden Markov random
field model and the expectation maximization algorithm.
IEEE Trans. on Medical Imaging, 20(1):45-57, 2001.
- 256
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N. Evangelou, D. Konz, M.M. Esiri, S. Smith, J. Palace, and P.M. Matthews.
Regional axonal loss in the corpus callosum correlates with cerebral
white matter lesion volume and distribution in multiple sclerosis.
Brain, 123(9):1845-1849, 2000.
- 257
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H. Johansen-Berg, V. Christensen, M. Woolrich, and P.M. Matthews.
Attention to touch modulates activity in both primary and secondary
somatosensory areas.
Neuroreport, 11(6):1237--41, 2000.
- 258
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M. Lee, H. Reddy, H. Johansen-Berg, S. Pendlebury, M. Jenkinson, S. Smith,
J. Palace, and P.M. Matthews.
The motor cortex shows adaptive functional changes to brain injury
from multiple sclerosis.
Annals of Neurology, 47(5):606-613, 2000.
- 259
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R. Pineiro, S.T. Pendlebury, S. Smith, D. Flitney, A.M. Blamire, P. Styles, and
P.M. Matthews.
Relating MRI changes to motor deficit after ischemic stroke by
segmentation of functional motor pathways.
Stroke, 31(1):672-9, March 2000.
- 260
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H. Reddy, S. Narayanan, R. Arnoutelis, M. Jenkinson, J. Antel, PM Matthews, and
DL Arnold.
Evidence for adaptive functional changes in the cerebral cortex with
axonal injury from multiple sclerosis.
Brain, 123(11):2314-2320, 2000.
- 261
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P.M. Hayton, M. Brady, S.M. Smith, and N. Moore.
A non-rigid registration algorithm for dynamic breast MR images.
Artificial Intelligence, 114:125-156, 1999.
- 262
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M.A. Lee, S. Smith, J. Palace, S. Narayanan, N. Silver, L. Minicucci,
M. Filippi, D.H. Miller, D.L. Arnold, and P.M. Matthews.
Spatial mapping of T2 and gadolinium-enhancing T1 lesion volumes
in MS: Evidence for distinct mechanisms of lesion genesis?
Brain, 122:1261-1270, 1999.
- 263
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M.A. Lee, S. Smith, J. Palace, and P.M. Matthews.
Defining multiple sclerosis disease activity using MRI
T
-weighted difference imaging.
Brain, 121:2095--2102, 1998.
- 264
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S.M. Smith and J.M. Brady.
SUSAN - a new approach to low level image processing.
International Journal of Computer Vision, 23(1):45-78, May
1997.
- 265
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S.M. Smith, G. Kindlmann, and S. Jbabdi.
Tract-based spatial statistics and other approaches for cross-subject
comparison of local diffusion MRI parameters.
In A. Toga, editor, Brain Mapping: An Encyclopedic Reference.
Academic Press: Elsevier, 2015.
- 266
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S.M. Smith and G. Kindlmann.
Cross-subject comparison of local diffusion MRI parameters.
In H. Johansen-Berg and T. Behrens, editors, Imaging brain
pathways - Diffusion MRI: from quantitative measurement to in-vivo
neuroanatomy. Elsevier, 2009.
- 267
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M.W. Woolrich, C.F. Beckmann, T.E. Nichols, and S.M. Smith.
Statistical analysis of fMRI data.
In M. Filippi, editor, fMRI Techniques and Protocols.
Springer-Verlag, 2009.
- 268
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M. Jenkinson.
Registration, atlases and cortical flattening.
In P. Jezzard, P.M. Matthews, and S.M. Smith, editors, Functional MRI: An Introduction to Methods. OUP, Oxford, 2001.
- 269
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M. Jenkinson and S.M. Smith.
The role of registration in functional magnetic resonance imaging.
In J. Hajnal, D.J. Hawkes, and D. Hill, editors, Medical Image
Registration, chapter 8. CRC Press, 2001.
- 270
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S.M. Smith.
Overview of fMRI analysis.
In P. Jezzard, P.M. Matthews, and S.M. Smith, editors, Functional MRI: An Introduction to Methods. OUP, Oxford, 2001.
- 271
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S.M. Smith.
Preparing fMRI data for statistical analysis.
In P. Jezzard, P.M. Matthews, and S.M. Smith, editors, Functional MRI: An Introduction to Methods. OUP, Oxford, 2001.
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P. Jezzard, P.M. Matthews, and S.M. Smith, editors.
Functional MRI: An Introduction to Methods.
OUP, Oxford, 2001.
Stephen Smith
2015-09-02