README of output files (SNP2GENE) from FUMA web application Author: Kyoko Watanabe (k.watanabe@vu.nl) Version: 1.0.0 (2 Feb 2017) Version: 1.1.2 (27 Apr 2017) Version: 1.3.0 (21 Feb 2018) Version: 1.3.1 (27 Apr 2018) Version: 1.3.4 (8 Feb 2019) Version: 1.3.5 (27 May 2019) Version: 1.3.5d (14 Oct 2019) ###################### # ciSNPs.txt # This file is only available when chromatin interaction mapping is performed. # The file contains candidate SNPs which overlap with one end (region 1) of significant chromatin interaction and enhancer regions of user selected epigenomes. # If any epigenome was selected, this file is empty. ###################### uniqID : Unique ID of SNPs consists of chr:position:allele1:allele2 where alleles are alphabetically ordered. rsID : rsID based on dbSNP build 146 chr : chromosome pos : position on hg19 reg_region : Predicted enhancer or dyadic regions type : enh for enhancer and dyadic for dyadic enhancer/promoter regions tissue/cell : EID of 111 Roadmap epigenomes