README of output files (SNP2GENE) from FUMA web application Author: Kyoko Watanabe (k.watanabe@vu.nl) Version: 1.0.0 (2 Feb 2017) Version: 1.1.2 (27 Apr 2017) Version: 1.3.0 (21 Feb 2018) Version: 1.3.1 (27 Apr 2018) Version: 1.3.4 (8 Feb 2019) Version: 1.3.5 (27 May 2019) Version: 1.3.5d (14 Oct 2019) ###################### # leadSNPs.txt # lead SNPs defined at r2 0.1 ###################### No : Index of lead SNPs Genomic Locus : Index of assigned genomic locus matched with "GenomicRiskLoci.txt". Multiple independent lead SNPs can be assigned to the same genomic locus. uniqID : Unique ID of SNPs consists of chr:position:allele1:allele2 where alleles are alphabetically ordered. rsID : rsID based on dbSNP build 146. chr : chromosome pos : position on hg19 p : P-value (from the input file). nIndSigSNPs : The number of independent significant SNPs which are in LD of the lead SNP at r2 0.1 IndSigSNPs : rsID of independent significant SNPs which are in LD of the lead SNP at r2 0.1