UK Biobank Brain Imaging - Image Processing Pipeline


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The UK Biobank central image processing pipeline can be found on github at https://git.fmrib.ox.ac.uk/falmagro/UK_biobank_pipeline_v_1 Below are some large ancillary data files that are needed in conjunction with the pipeline.

FIX rfMRI cleanup training data file: UKBiobank.RData. This should be put into folder bb_pipeline_v_1.0/bb_functional_pipeline/bb_fix_dir/training_files

BIANCA lesion segmentation training files bianca_class_data and bianca_class_data_labels. These should be put into folder bb_pipeline_v_1.0/bb_data.